Somehow I thought all settings are stored in that folder, but I just found they are not, you are right.
From help:
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Toolbar, menu, and keyboard customizations are stored in the user's application data folder (%APPDATA%\Kinook Software\Ultra Recall or C:\Documents and Settings\<username>\Application Data\Kinook Software\Ultra Recall).
Other settings are stored in the registry under the key HKEY_CURRENT_USER\Software\Kinook Software\Ultra Recall\.
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So you would need to run regedit.exe and export the above registry key and import it on the second computer.
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